BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H03LP1|AL426106
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig126 1566 0.0
>3x_Contig126
Length = 1112
Score = 1566 bits (790), Expect = 0.0
Identities = 824/833 (98%), Gaps = 2/833 (0%)
Strand = Plus / Plus
Query: 1 gatcctggtcaaccattgtacagtgtatggctgtacatagttatgtcctacctggtattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatcctggtcaaccattgtacagtgtatggctgtacatagttatgtcctacctggtattc 324
Query: 61 ttaatattcggacttggatctgatgcattaaacatgtatgcaaacttcctcagaaccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaatattcggacttggatctgatgcattaaacatgtatgcaaacttcctcagaaccatc 384
Query: 121 ggacttggtgtagtgattgattctattacggattggagaatcaagcacaaggatacgcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggacttggtgtagtgattgattctattacggattggagaatcaagcacaaggatacgcgc 444
Query: 181 gtcggtaaaatcactgaaaagattctacctaacaaccctcaacagcaggacaattacgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcggtaaaatcactgaaaagattctacctaacaaccctcaacagcaggacaattacgcc 504
Query: 241 caattctattgcggtagctcatctgatggtgtcgtgacaatgtccgattattccgaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caattctattgcggtagctcatctgatggtgtcgtgacaatgtccgattattccgaaaag 564
Query: 301 atggactccccaagttccccatcacaatttgaaattgattatacgttaccccatgaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggactccccaagttccccatcacaatttgaaattgattatacgttaccccatgaaaga 624
Query: 361 aacatgaagaactatgatcctcataatcaatatgaaatagatcctaaattatcgatattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacatgaagaactatgatcctcataatcaatatgaaatagatcctaaattatcgatattt 684
Query: 421 tcccattctatctctcatgacagcgatgcatcatcagaacttgatactccaaatgcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcccattctatctctcatgacagcgatgcatcatcagaacttgatactccaaatgcaatg 744
Query: 481 ngtaacgaatctaatcagttgcaatatcactacagactagatcgtcgctaatcttgtgtt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtaacgaatctaatcagttgcaatatcactacagactagatcgtcgctaatcttgtgtt 804
Query: 541 ttttaacagttaggtttttctttaaatataaaaacatacgtagtctttccagcagtttta 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 805 ttttaacagttaggtttttctttaaatataaccccatacgtagtctttccagcagtttta 864
Query: 601 atcaagtttaagtttacaacaaagaataggtgttcaatactacttatcaaaagtttgtca 660
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 865 atcaagtttaagtttacaacacagaataggtgttcaatactacttatc-aaagtttgtca 923
Query: 661 tataatgtaaacatcaatgcaatgacgttgaaaccataaaaagtcttcatcatcaaaatc 720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tataatgt-aacatcaatgcaatgacgttgaaaccataaaaagtcttcatcatcaaaatc 982
Query: 721 tggcagcttccaaagaatcatgtctaaacatcgttactagcatattcgttgatgttcaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tggcagcttccaaagaatcatgtctaaacatcgttactagcatattcgttgatgttcaag 1042
Query: 781 atgtactcgtagaagaacgcaatgatagacaaatgattagaaacttcaacgtg 833
||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1043 atgtactcgtagaagaacgcaatgatagacaaatgcttagacacttcaacgtg 1095
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6936
Number of Sequences: 1807
Number of extensions: 6936
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)